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Yuan1z0825

Nature Literature Pipeline skill

Complete automated literature discovery pipeline: multi-source search → six-dimension scoring → fine reading → formatted delivery → archival. Combines a configurable engine with daily cron-driven application layer. Works with Feishu, Telegram, or any messaging platform.

$npx skills add Yuan1z0825/nature-skills --skill nature-literature-pipeline
View this skill on GitHubYuan1z0825/nature-skills/skills/nature-literature-pipeline/SKILL.md
Pack stars
53,060
Pack installs
301k
Alyn Score
80/99
Updated
22 h ago
License
Apache-2.0
– views – installs via Alyn

Install Nature Literature Pipeline

Pick your agent. Every command is ready to paste.

$npx skills add Yuan1z0825/nature-skills --skill nature-literature-pipeline

The open skills CLI detects your agents (Claude Code, Cursor, Codex and 70+ more) and installs to the right folder. Add -g to install globally.

01

Install it

Run the command above, or upload the folder in Claude.

02

Ask naturally

Describe the task. Your agent loads nature-literature-pipeline when the request matches its description.

03

Name it if needed

If it does not trigger, say “use the nature-literature-pipeline skill”. In Codex, type $nature-literature-pipeline.

The skill itself

SKILL.md

FolderGitHub

Nature Literature Pipeline

A complete, production-tested automated literature pipeline. Not just "search for papers" — it's a structured engine that scores, classifies, reads, delivers, and archives research papers daily.

What It Does

Cron (daily trigger, e.g. 08:30)
  │
  ├─ ① SEARCH (30 candidates)
  │   arXiv / OpenAlex / Crossref / Semantic Scholar (auto-degradation)
  │
  ├─ ② COARSE FILTER (30 → 5)
  │   Six-dimension scoring: topic match × 35 + methodology × 20
  │   + journal quality × 15 + network relevance × 10
  │   + applied value × 10 + archival value × 10
  │
  ├─ ③ FINE READ (top 5)
  │   Abstract-level or full-text. Source level tagged:
  │   Full-text / Abstract only / Metadata only
  │
  ├─ ④ DELIVER
  │   Formatted digest to Feishu/Telegram/etc.
  │   🏅 rank | title | journal | ⭐ score | 💡 one-liner
  │   🔬 methods | 📊 key results | 🧭 commentary
  │
  └─ ⑤ ARCHIVE
      DOI/arXiv de-dup → classify → write notes → update index

Quick Start

After installing, tell your agent:

My research area is [X], keywords: [Y], deliver to [feishu group name], archive to [path]

The agent will configure keywords, delivery target, and archive path automatically.

Then set up a daily cron job:

Set up a daily literature push at 08:30 Beijing time, 30 candidates, top 5 delivered

Architecture

The skill is organized in two layers:

Layer Purpose Files
Engine Scoring, classification, note templates, gap analysis references/scoring-system.md, references/gap-analysis.md, references/note-template.md
Application Daily cron pipeline, delivery formatting, archival workflow references/push-format.md, references/cron-setup.md, references/review-compilation-workflow.md

Configuration

All domain-specific content is configurable:

  • Keywords — your research keywords (English + Chinese)
  • Scoring weights — adjust the six dimensions for your field
  • Classification rules — define your own tier system (A-E or custom)
  • Delivery target — Feishu group, Telegram channel, email, etc.
  • Archive path — local vault/wiki directory

A config template is provided in templates/literature-push-template.md.

Built-in Safeguards

  • Score validation: Each dimension capped, total recalculated — no 11/10 allowed
  • Triple de-duplication: DOI / arXiv ID / OpenAlex ID
  • Graceful degradation: Semantic Scholar down → auto-switch to OpenAlex + Crossref + arXiv
  • Read-only archive: Daily pipeline writes to raw/ literature directory only; never modifies wiki/knowledge base without user approval
  • nature-academic-search — ad-hoc literature search (complementary; this skill adds structured daily automation)
  • nature-citation — CNS citation export (for importing pipeline discoveries into manuscripts)
  • zotero — library management (for long-term organization of pipeline outputs)
  • arxiv — arXiv API (used as a search source)

References

Reference Purpose
references/scoring-system.md Six-dimension scoring rubric with weights, caps, and evaluation logic
references/gap-analysis.md Methodology for identifying research gaps through systematic literature survey
references/note-template.md Standardized literature note format with YAML frontmatter
references/push-format.md Daily digest message template with field guidelines and example
references/cron-setup.md Cron job creation, verification, and manual fallback procedures
references/review-compilation-workflow.md End-to-end workflow for concentrated literature review writing

Pitfalls

  1. Keyword drift: Review keywords monthly — research directions evolve
  2. Score inflation: Subagents may inflate scores; always validate arithmetic
  3. Duplicate creep: Classic papers will reappear; maintain a dedup index
  4. Wiki safety: Pipeline writes to raw/ only; wiki integration is manual
  5. Cron locality: Hermes cron is local, not cloud — machine must be running

Tips for Nature Literature Pipeline

  • • Start a fresh session after installing so your agent picks up the new skill.
  • • It bundles reference files. The agent reads them only when needed, so they cost no context until then.
  • • It is part of a pack with 24 skills. Install only the ones you need with --skill to keep triggers precise.
  • • If two skills overlap, mention the one you want by name.

Questions about Nature Literature Pipeline

What does the Nature Literature Pipeline skill do?

Complete automated literature discovery pipeline: multi-source search → six-dimension scoring → fine reading → formatted delivery → archival. Combines a configurable engine with daily cron-driven application layer. Works with Feishu, Telegram, or any messaging platform.

How do I install Nature Literature Pipeline?

Run "npx skills add Yuan1z0825/nature-skills --skill nature-literature-pipeline" in your project. The skills CLI installs it for Claude Code, Cursor, Codex and 70+ other agents. In Claude on the web, upload the skill folder as a ZIP under Customize > Skills.

Does Nature Literature Pipeline work in Cursor and Codex?

Yes. Nature Literature Pipeline uses the open SKILL.md format, so it works in Claude Code, Claude, Cursor, OpenAI Codex, Gemini CLI, GitHub Copilot and other agents that support agent skills.

Is Nature Literature Pipeline free?

Nature Literature Pipeline is open source on GitHub under the Apache-2.0 license. It is free to install; check the license before commercial use.

Who made Nature Literature Pipeline?

Nature Literature Pipeline is published by Yuan1z0825 in the Yuan1z0825/nature-skills repository, together with 23 other skills.

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